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Tue, 09/30/2014 - 15:03

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tony wify's picture
tony wify in replay to: Post-ASHG Update on Genome in a Bottle

A very good article on the PGP issue and I've done an extensive research to withhold the truth about the subject. Thanks for the share.
Regards,
Lucas Duplan Clinkle

vasya's picture
vasya in replay to: New high-confidence NA12878 genotypes integrating phased pedigree calls

Yes -- the readme file is not in a plain text format!

SteveL's picture
SteveL in replay to: New high-confidence NA12878 genotypes integrating phased pedigree calls

Thanks for this great resources. I don't know if you have any control over the NCBI ftp site, but the README.GIAB.v0.2.txt file appears to be garbled in some way. Best, Steve

mrp's picture
mrp in replay to: Examples of using our highly confident snp and indel genotypes for NA12878

We found it quite helpful to have the NIST high confidence call set as an outside standard in our recent exome analysis. http://www.personalis.com/assets/files/posters/ashg2013/Towards_a_medica...
Thanks Justin!